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matE2 matE2 HTIA_2535 HTIA_2535 HTIA_2318 HTIA_2318 tbpD tbpD tbpE tbpE HTIA_0815 HTIA_0815 crtB2 crtB2 fdfT fdfT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
matE2Multi antimicrobial extrusion protein (Na(+) / drug antiporter), MATE family of MDR efflux pumps. (488 aa)    
Predicted Functional Partners:
HTIA_2535
ABC transporter, ATP-binding protein.
  
    0.561
HTIA_2318
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.521
tbpD
TATA-box binding protein.
   
    0.511
tbpE
Transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
   
    0.511
HTIA_0815
Hypothetical protein.
       0.501
crtB2
Phytoene synthase.
   
   0.498
fdfT
Phytoene synthase.
   
   0.498
Your Current Organism:
Halorhabdus tiamatea
NCBI taxonomy Id: 1033806
Other names: H. tiamatea SARL4B, Halorhabdus tiamatea JCM 14471, Halorhabdus tiamatea SARL4B, Halorhabdus tiamatea str. SARL4B, Halorhabdus tiamatea strain SARL4B
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